AEVOL

NAME

Aevol - an in silico experimental evolution platform

SYNOPSIS

aevol_misc_lineage -h | --help
aevol_misc_lineage -V | --version
aevol_misc_lineage [-b TIMESTEP] [-e TIMESTEP] [-I INDEX | -R RANK] [-F] [-v]

DESCRIPTION

Aevol is a simulation platform that allows one to let populations of digital organisms evolve in different conditions and study experimentally the mechanisms responsible for the structuration of the genome and the transcriptome.
aevol_misc_lineage

reconstruct the lineage of a given individual from the tree files

OPTIONS

-h, --help

print help, then exit

-V, --version

print version number, then exit

-b, --begin

TIMESTEP

specify time t0 up to which to reconstruct the lineage

-e, --end

TIMESTEP

specify time t_end of the indiv whose lineage is to be reconstructed

-I, --index

INDEX

specify the index of the indiv whose lineage is to be reconstructed

-R, --rank

RANK

specify the rank of the indiv whose lineage is to be reconstructed default: best individual

-F, --full-check

perform genome checks whenever possible

-v, --verbose

be verbose

SEE ALSO

aevol_create, aevol_modify, aevol_propagate, aevol_run