ASSEMBLY-STATS

NAME

assembly-stats - get assembly statistics from FASTA and FASTQ files

SYNOPSIS

stats [options] <list of fasta/q files>

DESCRIPTION

Reports sequence length statistics from fasta and/or fastq files

OPTIONS

-l <int>

Minimum length cutoff for each sequence. Sequences shorter than the cutoff will be ignored [1]

-s

Print ’grep friendly’ output

-t

Print tab-delimited output

-u

Print tab-delimited output with no header line

-v

Print version and exit

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.