BAMHEADRG.PY

NAME

bamheadrg.py - Inject readgroup info

SYNOPSIS

bamheadrg.py [-h] [-r READGROUP] -d DONOR [-S] [recipient]

DESCRIPTION

Inject readgroup info

OPTIONS

positional arguments:

recipient

SAM file to inject header lines into. If ’-’ or absent then defaults to stdin.

optional arguments:

-h, --help

show this help message and exit

-r READGROUP, --readgroup READGROUP

Read group(s) to extract (comma separated)

-d DONOR, --donor DONOR

Donor BAM/SAM file to extract read group info

-S, --donor_is_sam

Donor file is SAM

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.