collapse_partials(1)
Collection of tools to annotate genomes using long read transcriptomics data
Description
COLLAPSE_PARTIALS
NAME
collapse_partials - Collection of tools to annotate genomes using long read transcriptomics data
DESCRIPTION
Usage of collapse_partials:
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-M |
Discard monoexonic transcripts. |
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-U |
Discard transcripts which are not oriented. |
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-V |
Print out version. |
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-d int |
Internal exon boundary tolerance. (default 5)
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-e int |
Three prime exons boundary tolerance. (default 30)
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-f int |
Five prime exons boundary tolerance. (default 5000)
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-h |
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Print out help message. |
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-prof |
string
Write out CPU profiling information.
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-t int |
Number of cores to use. (default 4)
AUTHOR
This manpage was
written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.