fastaq-to_orfs_gff(1)

Writes a GFF file of open reading frames

Section 1 fastaq bookworm source

Description

FASTAQ-TO_ORFS_GFF

NAME

fastaq_to_orfs_gff - Writes a GFF file of open reading frames

DESCRIPTION

usage: fastaq_to_orfs_gff [options] <infile> <outfile>

Writes a GFF file of open reading frames from a sequence file

positional arguments:

infile

Name of input file

outfile

Name of output GFF file

options:

-h, --help

show this help message and exit

--min_length INT

Minimum length of ORF, in nucleotides [300]