ffindex_from_fasta(1)
populate index from FASTA file
Description
FFINDEX_FROM_FASTA
NAME
ffindex_from_fasta - populate index from FASTA file
DESCRIPTION
USAGE: ffindex_from_fasta -v | [-s] data_filename index_filename fasta_filename
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-s |
sort index file |
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-i |
use identifier as name (you probably want -s too) |
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-n |
use incremental number as id (default) |
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-v |
print version |
ENVIRONMENT
FFINDEX_MAX_INDEX_ENTRIES - allocate memory for this number of entries
Designed and implemented by Andreas Hauser <andy@splashground.de>.
BUGS
User feedback is welcome, especially bugs, performance issues and last but not least convenience of the programs and API .
Email Andreas Hauser hauser@genzentrum.lmu.de.