filter_blat(1)

Validate contigs by blat.

Section 1 idba-extra bookworm source

Description

FILTER_BLAT

NAME

filter_blat - Validate contigs by blat.

SYNOPSIS

validate_contigs_blat ref.fa contigs.fa.

DESCRIPTION

filter_blat: invalid option -- ’h’ validate_contigs_blat - validate contigs by blat.

Allowed Options:

--min_contig arg (=100)

minimum contigs

--similar arg (=0.95)

similarity

--is_local

is local

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.