filter_contigs(1)

Simulate sequencing reads from references.

Section 1 idba-extra bookworm source

Description

FILTER_CONTIGS

NAME

filter_contigs - Simulate sequencing reads from references.

SYNOPSIS

fq2fa tmp.fq tmp.fa [...]

DESCRIPTION

filter_contigs - Convert Fastq sequences to Fasta sequences.

fq2fa --paired tmp.fq tmp.fa fq2fa --merge tmp_1.fq tmp_2.fq tmp.fa

Allowed Options:

--min_contig arg (=100)

filter out reads containing ’N’

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.