gffutils-cli-region(1)

Returns features within provided genomic coordinates

Section 1 python3-gffutils bookworm source

Description

GFFUTILS-CLI_REGION

NAME

gffutils-cli_region - Returns features within provided genomic coordinates

DESCRIPTION

usage: gffutils-cli region [-h] db region

Returns features within provided genomic coordinates.

positional arguments:

db

Database to use. If a GFF or GTF file is provided instead for this argument, a database will be created for you. This can take some time (several minutes), so it’s best to create one ahead of time.

region

Genomic coordinates of the form "chrom:start-stop"

options:

-h, --help

show this help message and exit