maf-cut(1)

manual page for maf-cut 1447

Section 1 last-align bookworm source

Description

MAF-CUT

NAME

maf-cut - manual page for maf-cut 1447

DESCRIPTION

usage: maf-cut [-h] segment [alignments] [sequences ...]

Get parts of MAF-format alignments.

positional arguments:

segment

zero-based sequence range, e.g. chr7:123400-123500

alignments

file of sequence alignments in MAF format

sequences

file of sequences in fasta or fastq format

options:

-h, --help

show this help message and exit