ORTHANCWSIDICOMTOTIFF

NAME

OrthancWSIDicomToTiff - Whole-slide imaging support for Orthanc

SYNOPSIS

OrthancWSIDicomToTiff [OPTION]... [INPUT] [OUTPUT]

DESCRIPTION

Orthanc, lightweight, RESTful DICOM server for healthcare and medical research.

Convert a DICOM image for digital pathology stored in some Orthanc server as a standard hierarchical TIFF (whose tiles are all encoded using JPEG).

Generic options:

--help

Display this help and exit

--version

Output version information and exit

--verbose

Be verbose in logs

Options for the source DICOM image:

--orthanc arg (=http://localhost:8042/)

URL to the REST API of the target Orthanc server

--username arg

Username for the target Orthanc server

--password arg

Password for the target Orthanc server

--proxy arg

HTTP proxy to be used

--timeout arg (=0)

HTTP timeout (in seconds, 0 means no timeout)

--verify-peers arg (=1)

Enable the verification of the peers during HTTPS requests

--ca-certificates arg

Path to the CA (certification authority) certificates to validate peers in HTTPS requests

Options for the target TIFF image:

--color arg

Color of the background for missing tiles (e.g. "255,0,0")

--reencode arg

Whether to re-encode each tile in JPEG (no transcoding, much slower) (Boolean)

--jpeg-quality arg

Set quality level for JPEG (0..100)

AUTHOR

Written by Sebastien Jodogne <s.jodogne@orthanc-labs.com>

COPYRIGHT

Copyright © 2012-2016 Sebastien Jodogne, Medical Physics Department, University Hospital of Liege (Belgium)
Copyright © 2017-2021 Osimis S.A. (Belgium)
Copyright © 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain (Belgium) Licensing AGPL: GNU AGPL version 3 or later <http://gnu.org/licenses/agpl.html>.
This is free software: you are free to change and redistribute it. There is NO WARRANTY, to the extent permitted by law.