PROKKA-CDD_TO_HMM

NAME

prokka-cdd_to_hmm - rapid annotation of prokaryotic genomes

SYNOPSIS

prokka-cdd_to_hmm [options] # will write LIB.aln and LIB.hmm

DESCRIPTION

--help

This help.

--verbose!

Verbose output (default ’0’).

--srcdir=s

CDD download dir (default ’/bio/data/cdd/latest/’).

--lib=s

Subset of CDD to create (default ’COG’).

--force!

Force overwrite of output files: LIB.aln LIB.hmm (default ’0’).