qiime(1)

Click-based command line interface for QIIME 2

Section 1 q2cli bookworm source

Description

Q2CLI

NAME

q2cli - Click-based command line interface for QIIME 2

SYNOPSIS

qiime [OPTIONS] COMMAND [ARGS]...

DESCRIPTION

QIIME 2 command-line interface (q2cli) --------------------------------------

To get help with QIIME 2, visit https://qiime2.org.

To enable tab completion in ZSH, run the following commands or add them to your .zshrc:

autoload bashcompinit && bashcompinit && source /usr/share/bashcompletion/completions/qiime

OPTIONS

--version

Show the version and exit.

--help

Show this message and exit.

Commands:

info

Display information about current deployment.

tools

Tools for working with QIIME 2 files.

dev

Utilities for developers and advanced users.

Run ‘qiime info‘ for more version details.