ragout-maf2synteny(1)

Reference-Assisted Genome Ordering UTility

Section 1 ragout bookworm source

Description

RAGOUT-MAF2SYNTENY

NAME

ragout-maf2synteny - Reference-Assisted Genome Ordering UTility

SYNOPSIS

maf2synteny [-o out_dir] [-s simpl_params] [-m block_sizes] maf_file

OPTIONS

positional arguments:

maf_file

path to maf file

optional arguments:

-o out_dir

path to the output directory [default = .]

-s simpl_params path to a file with custom simplification parameters [default = not set]

-b block_sizes

comma-separated list of synteny block scales [default = 5000]

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.