SIMKAMERGE

NAME

simkaMerge - comparative metagenomics method dedicated to NGS datasets

DESCRIPTION

ERROR: Unknown parameter ’-h’ ERROR: Option ’-nb-cores’ is mandatory ERROR: Option ’-kmer-size’ is mandatory ERROR: Option ’-in’ is mandatory ERROR: Option ’-out-tmp-simka’ is mandatory ERROR: Option ’-partition-id’ is mandatory ERROR: Option ’-nb-cores’ is mandatory ERROR: Option ’-max-memory’ is mandatory ERROR: Option ’-kmer-shannon-index’ is mandatory

[SimkaMerge options]
-nb-cores

(1 arg) : number of cores [default ’0’]

-verbose

(1 arg) : verbosity level [default ’1’]

-version

(0 arg) : version

-help

(0 arg) : help

-nb-cores

(1 arg) : nb cores

-kmer-size

(1 arg) : kmer size

-in

(1 arg) : input filename

-out-tmp-simka

(1 arg) : tmp output

-partition-id

(1 arg) : bank name

-nb-cores

(1 arg) : bank name

-max-memory

(1 arg) : bank name

-kmer-shannon-index (1 arg) :

bank name

-simple-dist

(0 arg) : compute simple distances

-complex-dist

(0 arg) : compute complex distances

AUTHOR

This manpage was written by Shayan Doust for the Debian distribution and can be used for any other usage of the program.