SIMKAMINCORE

NAME

simkaMinCore - comparative metagenomics method dedicated to NGS datasets

SYNOPSIS

simkaMin [option]

DESCRIPTION

[Distance computation options]
sketch

: transform datasets in small sketches of k-mers and their abundance

distance

: compute Jaccard and Bray-Curtis distances between sketches

[Distance matrix manipulation options]
export

: export distance matrices stored in binary format

[Sketch options]
append

: merge multiple sketch files into a single one

AUTHOR

This manpage was written by Shayan Doust for the Debian distribution and can be used for any other usage of the program.