subread-fullscan(1)

toolkit for processing next-gen sequencing data

Section 1 subread bookworm source

Description

subread-fullscan - toolkit for processing next-gen sequencing data

subread-fullscan Version 2.0.1

This program scans the entire genome to find all high-similarity locations to

a specified read.

Usage:

./subread-fullscan [options] -i <index_name> <read_string>

Required arguments:
-i <string>

Base name of the index.

read_string

The read bases.

Optional arguments:
-m <float>

The minimum fraction of matched bases in the read, 0.8 by default

This manpage was written by Nilesh Patra for the Debian distribution and
can be used for any other usage of the program.