VCF-FIX-NEWLINES

NAME

vcf-fix-newlines - fix newlines in VCF file

SYNOPSIS

vcf-fix-newlines [OPTIONS]

DESCRIPTION

About: Reads in a VCF file with any (commonly used) newline representation and outputs with the

current system’s newline representation.

OPTIONS

-i, --info

Report if the file is consistent with the current platform based.

-h, -?, --help

This help message.

Example:

vcf-fix-newlines -i file.vcf vcf-fix-newlines file.vcf.gz > out.vcf cat file.vcf | vcf-fix-newlines > out.vcf