vcfcleancomplex(1)
\f[B]vcfcleancomplex\f[R]
Description
VCFCLEANCOMPLEX
NAME
vcfcleancomplex
SYNOPSIS
vcfcleancomplex
DESCRIPTION
Removes reference-matching sequence from complex alleles and adjusts records to reflect positional change.
OPTIONS
Generate a VCF
stream in which 'long' non-complexalleles have their
position corrected.
assumes that VCF records can't overlap 5'->3'
Type: transformation
EXIT VALUES
|
0 |
Success |
|||
|
not 0 |
Failure |
SEE ALSO
vcflib(1)
OTHER
LICENSE
Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.
AUTHORS
Erik Garrison and vcflib contributors.