Hisat2

• hisat2-align-l(1) HISAT2 graph-based alignment of short nucleotide reads to many genomes, large index binary
• hisat2-align-s(1) HISAT2 graph-based alignment of short nucleotide reads to many genomes, small index binary
• hisat2-build-l(1) HISAT2 indexer, large index binary
• hisat2-build-s(1) HISAT2 indexer, small index binary
• hisat2-build(1) HISAT2 indexer, wrapper script
• hisat2-inspect-l(1) HISAT2 index inspector, large index binary
• hisat2-inspect-s(1) HISAT2 index inspector, small index binary
• hisat2-inspect(1) HISAT2 index inspector, wrapper script
• hisat2(1) graph-based alignment of short nucleotide reads to many genomes, wrapper script