Hmmer2

• hmm2align(1) hmm2align - align sequences to an HMM profile
• hmm2build(1) hmm2build - build a profile HMM from an alignment
• hmm2calibrate(1) hmm2calibrate - calibrate HMM search statistics
• hmm2convert(1) hmm2convert - convert between profile HMM file formats
• hmm2emit(1) hmm2emit - generate sequences from a profile HMM
• hmm2fetch(1) hmm2fetch - retrieve an HMM from an HMM database
• hmm2index(1) hmm2index - create a binary SSI index for an HMM database
• hmm2pfam(1) hmm2pfam - search one or more sequences against an HMM database
• hmm2search(1) hmm2search - search a sequence database with a profile HMM
• hmmer2(1) HMMER - profile hidden Markov model software