Meryl
- existDB(1) management of existDB files
- kmer-mask(1) mask and filter set of nucleotide sequences by kmer content
- mapMers-depth(1) report information about mapping kmers to sequences
- mapMers(1) report statistics of mapping kmers to sequences
- meryl(1) in- and out-of-core kmer counting and utilities
- positionDB(1) management of posDB files
- simple(1) the obvious array-based kmer counter