Presto

• AlignSets.py(1) Multiple aligns input sequences by group
• AssemblePairs.py(1) Assembles paired-end reads into a single sequence
• BuildConsensus.py(1) Builds a consensus sequence for each set of input sequences
• ClusterSets.py(1) Cluster sequences by group
• CollapseSeq.py(1) emoves duplicate sequences from FASTA/FASTQ files
• ConvertHeaders.py(1) Converts sequence headers to the pRESTO format
• EstimateError.py(1) Calculates annotation set error rates
• FilterSeq.py(1) Filters sequences in FASTA/FASTQ files
• MaskPrimers.py(1) Removes primers and annotates sequences with primer and barcode identifiers
• PairSeq.py(1) Sorts and matches sequence records with matching coordinates across files
• ParseHeaders.py(1) Parses pRESTO annotations in FASTA/FASTQ sequence headers
• ParseLog.py(1) Parses records in the console log of pRESTO modules
• SplitSeq.py(1) Sorts, samples and splits FASTA/FASTQ sequence files
• UnifyHeaders.py(1) Unifies annotation fields based on grouping scheme