Rapmap
- rapmap_pseudoindex(1) rapmap module to build a k-mer-based index
- rapmap_pseudomap(1) rapmap module to map reads using a k-mer-based index
- rapmap_quasiindex(1) rapmap module to build a suffix array-based (SA) index
- rapmap_quasimap(1) rapmap module to map reads using the SA-based index
- rapmap(1) rapid sensitive and accurate DNA read mapping via quasi-mapping