Staden-Io-Lib-Utils
- append_sff(1) combine multiple SFF files
- scramble(1) Converts between the SAM, BAM and CRAM file formats.
- srf_dump_all(1) dump data of SRF files
- srf_filter(1) filter SRF files for various purposes
- srf_index_hash(1) Adds a hash-table index to an SRF file.
- srf_info(1) Lists information about the contents of an SRF file
- srf_list(1) Lists and/or counts the contents of an SRF file
- srf2fasta(1) Converts SRF files to fasta format
- srf2fastq(1) Converts SRF files to Sanger fastq format